#NEXUS Begin trees; [Treefile saved Tue Nov 4 12:20:28 2003] [! >Data file = ./data.nex >Neighbor-joining search settings: > Ties (if encountered) will be broken systematically > Distance measure = uncorrected ("p") > (Tree is unrooted) ] Translate 1 A1.BY.97.97BL006, 2 A1.KE.00.KER2008, 3 A1.KE.00.KER2009, 4 A1.KE.00.KER2012, 5 A1.KE.00.KER2018, 6 A1.KE.00.KNH1144, 7 A1.KE.00.KNH1199, 8 A1.KE.00.KNH1207, 9 A1.KE.00.KNH1209, 10 A1.KE.00.KNH1211, 11 A1.KE.00.KNH1214, 12 A1.KE.00.KSM4024, 13 A1.KE.00.KSM4030, 14 A1.KE.00.MSA4069, 15 A1.KE.00.MSA4070, 16 A1.KE.00.MSA4072, 17 A1.KE.00.MSA4076, 18 A1.KE.00.MSA4079, 19 A1.KE.00.NKU3005, 20 A1.KE.00.NKU3007, 21 'A1.KE.93.Q23-17', 22 A1.KE.99.KNH1088, 23 A1.KE.99.KNH1135, 24 A1.KE.99.KSM4021, 25 A1.KE.99.KSM4023, 26 A1.SE.94.SE7253, 27 A1.SE.94.SE7535, 28 A1.SE.95.SE8538, 29 A1.SE.95.SE8891, 30 A1.SE.95.UGSE8131, 31 A1.TZ.97.97TZ02, 32 A1.TZ.97.97TZ03, 33 A1.UA.00.98UA0116, 34 'A1.UG.-.UG029', 35 'A1.UG.-.UG029', 36 'A1.UG.-.UG031', 37 'A1.UG.-.UG031', 38 A1.UG.85.U455, 39 A1.UG.92.92UG037, 40 A1.UG.98.98UG57134, 41 A1.UG.98.98UG57135, 42 A1.UG.98.98UG57136, 43 A1.UG.98.98UG57142, 44 A1.UG.99.99UGA07072, 45 A1.UG.99.99UGG03379, 46 A2.CD.97.97CDKTB48, 47 'A2.CY.94.94CY017-41', 48 'B.-.-.NL43WC001', 49 B.AR.00.ARMS008, 50 B.AR.98.ARCH054, 51 B.AR.99.ARMA132, 52 B.AR.99.ARMA173, 53 'B.AU.-.1181', 54 'B.AU.-.1182', 55 'B.AU.-.C18MBC', 56 'B.AU.-.C24', 57 'B.AU.-.C42', 58 'B.AU.-.C76', 59 'B.AU.-.C92', 60 'B.AU.-.VH', 61 B.AU.86.MBC200, 62 B.AU.87.MBC925, 63 B.AU.93.MBC18, 64 B.AU.93.MBCC18R01, 65 B.AU.95.MBCC54, 66 B.AU.96.MBCC98, 67 B.AU.96.MBCD36, 68 B.BO.99.BOL0122, 69 'B.BR.-.BZ167', 70 'B.CN.-.CNHN24', 71 'B.CN.-.RL42', 72 B.DE.86.D31, 73 B.DE.86.HAN, 74 'B.ES.-.S61D15', 75 'B.ES.-.S61G1', 76 'B.ES.-.S61G7', 77 'B.ES.-.S61I15', 78 'B.ES.-.S61K1', 79 B.ES.89.89SP061, 80 B.ES.89.S61, 81 B.ES.89.S61I1, 82 B.ES.89.S61K15, 83 'B.FR.-.F12CG', 84 'B.FR.-.NL4-3', 85 'B.FR.-.NL43', 86 B.FR.83.BH102, 87 B.FR.83.HXB2, 88 'B.FR.83.HXB2-copy', 89 B.FR.83.HXB2R, 90 B.FR.83.IIIB, 91 B.FR.83.LAI, 92 'B.FR.83.LAI\IIIB', 93 B.FR.83.MCK1, 94 B.FR.83.PM213, 95 B.FR.83.PV22, 96 B.FR.83.REHTLV3, 97 B.FR.83.TH475A, 98 B.FR.87.LW123, 99 B.GA.88.OYI, 100 B.GB.83.CAM1, 101 B.GB.86.GB8, 102 B.KR.97.WK, 103 'B.MM.-.mSTD101', 104 B.NL.86.3202A21, 105 'B.NL.86.H0320-2A12', 106 'B.TH.-.BK132', 107 B.TW.94.TWCYS, 108 'B.US.-.499JC16', 109 'B.US.-.NC7', 110 'B.US.-.NL43E9', 111 'B.US.-.NL43xWC001', 112 'B.US.-.US1', 113 'B.US.-.US2', 114 'B.US.-.US3', 115 'B.US.-.US4', 116 B.US.83.RF, 117 B.US.83.SF2, 118 B.US.84.MNCG, 119 B.US.84.NY5CG, 120 B.US.84.SF33, 121 B.US.85.WCIPR, 122 B.US.85.WCIPR, 123 B.US.85.WCIPR, 124 B.US.85.WCIPR, 125 B.US.85.WCIPR, 126 B.US.86.AD87, 127 B.US.86.JRCSF, 128 B.US.86.JRFL, 129 B.US.86.YU10, 130 B.US.86.YU2, 131 B.US.87.BC, 132 B.US.87.MNTQ, 133 B.US.88.WR27, 134 B.US.88.WR27, 135 B.US.89.P896, 136 B.US.90.WCIPR, 137 B.US.90.WCIPR, 138 B.US.90.WCIPR, 139 B.US.90.WCIPR, 140 B.US.90.WCIPR, 141 B.US.90.WEAU160, 142 'B.US.91.DH12-3', 143 'B.US.96.1299_d22', 144 'B.US.96.1304_d31', 145 'B.US.96.1333_d2', 146 B.US.97.ARES2, 147 C.BR.92.92BR025, 148 C.BR.98.98BR004, 149 C.BW.00.00BW07621, 150 C.BW.00.00BW076820, 151 C.BW.00.00BW087421, 152 C.BW.00.00BW147127, 153 C.BW.00.00BW16162, 154 C.BW.00.00BW1686., 155 C.BW.00.00BW17593, 156 C.BW.00.00BW17732, 157 C.BW.00.00BW17835, 158 C.BW.00.00BW17956, 159 C.BW.00.00BW18113, 160 C.BW.00.00BW18595, 161 C.BW.00.00BW18802, 162 C.BW.00.00BW192113, 163 C.BW.00.00BW20361, 164 C.BW.00.00BW20636, 165 C.BW.00.00BW20872, 166 C.BW.00.00BW2127214, 167 C.BW.00.00BW21283, 168 C.BW.00.00BW22767, 169 C.BW.00.00BW38193, 170 C.BW.00.00BW38428, 171 C.BW.00.00BW38713, 172 'C.BW.00.00BW3876-9', 173 'C.BW.00.00BW3886-8', 174 'C.BW.00.00BW3891-6', 175 'C.BW.00.00BW3970-2', 176 'C.BW.00.00BW5031-1', 177 C.BW.96.96BW01, 178 C.BW.96.96BW01B03, 179 C.BW.96.96BW01B22, 180 C.BW.96.96BW0402, 181 C.BW.96.96BW0407, 182 C.BW.96.96BW0408, 183 C.BW.96.96BW0409, 184 C.BW.96.96BW0410, 185 C.BW.96.96BW0502, 186 C.BW.96.96BW0504, 187 C.BW.96.96BW06, 188 C.BW.96.96BW06H51, 189 C.BW.96.96BW06J7, 190 C.BW.96.96BW06K18, 191 C.BW.96.96BW1104, 192 C.BW.96.96BW1106, 193 C.BW.96.96BW11B01, 194 C.BW.96.96BW1210, 195 C.BW.96.96BW15B03, 196 C.BW.96.96BW15C02, 197 C.BW.96.96BW15C05, 198 C.BW.96.96BW1626, 199 C.BW.96.96BW16B01, 200 C.BW.96.96BW16D14, 201 C.BW.96.96BW17, 202 C.BW.96.96BW17, 203 C.BW.96.96BW17, 204 C.BW.96.96BWM032, 205 'C.BW.96.96BWMO1-5', 206 C.BW.98.98BWMC122, 207 C.BW.98.98BWMC134, 208 C.BW.98.98BWMC14A3, 209 C.BW.98.98BWMO1410, 210 C.BW.98.98BWMO18D5, 211 C.BW.98.98BWMO36A5, 212 C.BW.98.98BWMO37D5, 213 C.BW.99.99BW393212, 214 C.BW.99.99BW46424, 215 C.BW.99.99BW47458, 216 C.BW.99.99BW47547, 217 C.BW.99.99BWMC168, 218 C.ET.86.ETH2220, 219 C.IL.98.98IS002, 220 C.IN.93.93IN101, 221 C.IN.93.93IN904, 222 C.IN.93.93IN905, 223 C.IN.93.93IN999, 224 C.IN.94.94IN11246, 225 C.IN.94.94IN476, 226 C.IN.95.95IN21068, 227 C.IN.98.98IN012, 228 C.IN.98.98IN022, 229 'C.IN.99.01IN565-10', 230 'C.IN.99.01IN565-11', 231 'C.IN.99.01IN565-13', 232 'C.IN.99.01IN565-14', 233 C.KE.00.KER2010, 234 'C.MM.-.mIDU101', 235 C.TZ.97.97TZ04, 236 C.TZ.97.97TZ05, 237 C.TZ.98.98TZ013, 238 C.TZ.98.98TZ017, 239 C.ZA.97.97ZA003, 240 C.ZA.97.97ZA009, 241 C.ZA.97.97ZA012, 242 C.ZA.98.98TV002, 243 C.ZA.98.98ZA445, 244 C.ZA.98.98ZA502, 245 C.ZA.98.98ZA528, 246 C.ZA.98.TV001, 247 C.ZA.98.TV001, 248 C.ZA.98.TV002, 249 C.ZA.98.TV012, 250 C.ZA.99.99ZACM9, 251 C.ZA.99.CTSC2, 252 C.ZA.99.DU151, 253 C.ZA.99.DU179, 254 C.ZA.99.DU422, 255 C.ZA.99.SW7, 256 C.ZM.96.96ZM651, 257 C.ZM.96.96ZM751, 258 D.CD.83.ELI, 259 D.CD.83.NDK, 260 D.CD.84.84ZR085, 261 D.CD.85.Z2Z6, 262 'D.KE.-.MB2059', 263 'D.KE.01.01KE_NKU3006', 264 'D.TD.-.patient-99TCD-MN011', 265 'D.TD.-.patient-99TCD-MN012', 266 'D.TD.99.99TCD-MN011', 267 'D.TD.99.99TCD-MN012', 268 D.UG.92.92UG001, 269 D.UG.94.94UG114, 270 D.UG.98.98UG57128, 271 D.UG.98.98UG57130, 272 D.UG.98.98UG57131, 273 D.UG.98.98UG57132, 274 D.UG.98.98UG57140, 275 D.UG.98.98UG57143, 276 D.UG.98.98UG57146, 277 D.UG.99.99UGA03349, 278 D.UG.99.99UGA07412, 279 D.UG.99.99UGA08483, 280 D.UG.99.99UGB21875, 281 D.UG.99.99UGB25647, 282 D.UG.99.99UGB32394, 283 D.UG.99.99UGD23550, 284 D.UG.99.99UGD26830, 285 D.UG.99.99UGE08364, 286 D.UG.99.99UGE13613, 287 D.UG.99.99UGE23438, 288 D.UG.99.99UGF03726, 289 D.UG.99.99UGF05734, 290 D.UG.99.99UGG10555, 291 D.UG.99.99UGG35093, 292 D.UG.99.99UGJ27597, 293 D.UG.99.99UGJ32228, 294 D.UG.99.99UGK09259, 295 D.UG.99.99UGK09958, 296 F1.BE.93.VI850, 297 'F1.BR.-.BZ126', 298 'F1.BR.-.BZ163', 299 F1.BR.93.93BR020.1, 300 F1.FI.93.FIN9363, 301 F1.FR.96.MP411, 302 F2.CM.95.MP255, 303 F2.CM.95.MP257, 304 F2.CM.97.CM53657, 305 G.BE.96.DRCBL, 306 G.ES.00.X558, 307 G.ES.99.X138, 308 'G.FI.93.HH8793-1.1', 309 'G.FI.93.HH8793-12.1', 310 G.NG.92.92NG083, 311 G.SE.93.SE6165, 312 H.BE.93.VI991, 313 H.BE.93.VI997, 314 H.CF.90.90CF056, 315 J.SE.93.SE7887, 316 J.SE.94.SE7022, 317 K.CD.97.EQTB11C, 318 K.CM.96.MP535, 319 U.CD.83.83CD003, 320 U.CD.90.90CD121E12 ; tree PAUP_1 = [&U] (1,((((((2,(((13,((((16,44),29),42),41)),17),(18,(23,(28,32))))),((((((((4,22),40),(19,(39,45))),30),(26,(34,35))),(36,37)),8),15)),(((3,14),(((5,(11,25)),20),(((6,(12,21)),((((7,31),24),10),9)),27))),43)),38),((46,47),((((((((((((((((((((((((((((((((((48,111),136),140),137),(138,139)),(((121,(122,123)),124),125)),(72,((83,(((((((86,96),92),95),93),98),((((87,88),89),94),97)),(90,91))),((84,85),110)))),((61,(62,(129,130))),113)),(127,128)),(((((74,80),((77,81),79)),(78,82)),(75,76)),(118,132))),106),131),69),112),((143,144),145)),((53,54),135)),((((55,64),63),(65,67)),66)),(((56,57),59),58)),142),(((60,101),(((73,126),(99,((104,105),117))),120)),(((100,119),114),141))),146),(51,52)),102),(107,(108,109))),(68,(133,134))),((70,71),103)),(115,116)),50),49),(((((258,261),259),260),((264,266),(265,267))),(((((((((((((((262,292),281),(286,(290,293))),269),282),(287,295)),(((273,276),280),279)),278),(277,289)),285),294),(272,288)),((263,283),270)),(274,(284,291))),((268,271),275)))),((((296,(((297,298),299),300)),301),(302,(303,304))),(317,318))),((((((147,148),(218,219)),((((((((149,161),216),(158,((164,(205,207)),(191,(192,193))))),249),157),257),153),(((((((((150,168),(((166,213),169),233)),(((((((((154,171),208),((187,189),(188,190))),162),((163,((195,197),196)),170)),(160,214)),(173,236)),((172,256),237)),((((((156,(185,186)),(167,((198,199),200))),(((177,179),178),245)),((((((220,222),(221,224)),226),234),228),((223,((229,(231,232)),230)),227))),244),((174,215),((239,((241,(252,254)),255)),253))))),(((151,206),159),251)),((((175,212),240),225),211)),(((165,209),((((180,(182,184)),(181,183)),((210,243),(242,248))),250)),(246,247))),(204,(235,238))),(194,217)),155))),176),(152,(201,(202,203)))),((312,(313,314)),(319,320)))),(315,316)),((305,(310,311)),((306,307),(308,309)))))),33)); End;